1. cytosignal::db.cont
    Interaction database derived from CellphoneDB V2
    json| rda| rds
    list
  2. cytosignal::db.diff
    Interaction database derived from CellphoneDB V2
    json| rda| rds
    list
  3. cytosignal::g_to_u
    Interaction database derived from CellphoneDB V2
    csv| xlsx| json| ndjson| rda| rds
    data.frame|977 x 3
  4. cytosignal::inter.index
    Interaction database derived from CellphoneDB V2
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1396 x 11
  5. CytoSimplex::rnaCluster
    Major cell type annotation of the example mouse bone marrow data
    json| rda| rds
    factor
  6. CytoSimplex::rnaRaw
    Mouse bone marrow scRNAseq example data
    rda| rds
    dgCMatrix
  7. CytoSimplex::rnaVelo
    Velocity graph of the example mouse bone marrow data
    rda| rds
    dgCMatrix
  8. RcppPlanc::ctrl.sparse
    Example single-cell transcriptomic data in sparse form
    rda| rds
    dgCMatrix
  9. RcppPlanc::stim.sparse
    Example single-cell transcriptomic data in sparse form
    rda| rds
    dgCMatrix
  10. rliger::bmmc
    liger object of bone marrow subsample data with RNA and ATAC modality
    rda| rds
    liger
  11. rliger::deg.marker
    Data frame for example marker DEG test result
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1992 x 7
  12. rliger::deg.pw
    Data frame for example pairwise DEG test result
    csv| xlsx| json| ndjson| rda| rds
    data.frame|1743 x 7
  13. rliger::pbmc
    liger object of PBMC subsample data with Control and Stimulated datasets
    rda| rds
    liger
  14. rliger::pbmcPlot
    liger object of PBMC subsample data with plotting information available
    rda| rds
    liger